Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.21□□□□□ -0.29
RetP35546 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.21□□□□□ -0.29
RetP35546 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.21□□□□□ -0.29
RetP35546 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Gm27680-201ENSMUST00000184192 160 ntBASIC13.21□□□□□ -0.29
RetP35546 Gm18766-201ENSMUST00000189811 808 ntBASIC13.21□□□□□ -0.29
RetP35546 Gm37230-201ENSMUST00000194491 818 ntBASIC13.21□□□□□ -0.29
RetP35546 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RetP35546 Gm45098-201ENSMUST00000207179 657 ntBASIC13.21□□□□□ -0.29
RetP35546 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.21□□□□□ -0.29
RetP35546 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.21□□□□□ -0.29
RetP35546 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
RetP35546 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RetP35546 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RetP35546 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RetP35546 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RetP35546 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RetP35546 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
RetP35546 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RetP35546 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RetP35546 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RetP35546 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RetP35546 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RetP35546 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.2□□□□□ -0.3
RetP35546 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.2□□□□□ -0.3
RetP35546 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RetP35546 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RetP35546 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.2□□□□□ -0.3
RetP35546 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.2□□□□□ -0.3
RetP35546 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RetP35546 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RetP35546 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RetP35546 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RetP35546 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.19□□□□□ -0.3
RetP35546 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RetP35546 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RetP35546 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RetP35546 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
RetP35546 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.19□□□□□ -0.3
RetP35546 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Gm27533-201ENSMUST00000183800 152 ntBASIC13.19□□□□□ -0.3
RetP35546 Gm7775-201ENSMUST00000218871 853 ntBASIC13.19□□□□□ -0.3
RetP35546 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RetP35546 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RetP35546 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RetP35546 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.18□□□□□ -0.3
RetP35546 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RetP35546 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms