Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Mmp3P28862 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp3P28862 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.02■□□□□ -0
Mmp3P28862 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.02■□□□□ -0
Mmp3P28862 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp3P28862 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Mmp3P28862 Gm29741-201ENSMUST00000192667 421 ntBASIC15.02■□□□□ -0
Mmp3P28862 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.02■□□□□ -0
Mmp3P28862 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Mmp3P28862 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.02■□□□□ -0
Mmp3P28862 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Mmp3P28862 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp3P28862 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.01□□□□□ -0.01
Mmp3P28862 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Mmp3P28862 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Mmp3P28862 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Gm26464-201ENSMUST00000157094 305 ntBASIC15.01□□□□□ -0.01
Mmp3P28862 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.01□□□□□ -0.01
Mmp3P28862 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Gm25857-201ENSMUST00000082788 129 ntBASIC15.01□□□□□ -0.01
Mmp3P28862 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Mmp3P28862 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Mmp3P28862 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Mmp3P28862 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp3P28862 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Mmp3P28862 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Gm17150-201ENSMUST00000165577 381 ntBASIC15□□□□□ -0.01
Mmp3P28862 Gm3809-201ENSMUST00000180973 1006 ntBASIC15□□□□□ -0.01
Mmp3P28862 Gm27772-201ENSMUST00000184900 187 ntBASIC15□□□□□ -0.01
Mmp3P28862 Gm2495-201ENSMUST00000191160 466 ntBASIC15□□□□□ -0.01
Mmp3P28862 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 AC192088.1-201ENSMUST00000227561 301 ntBASIC15□□□□□ -0.01
Mmp3P28862 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Mmp3P28862 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Mmp3P28862 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Mmp3P28862 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Gm5912-201ENSMUST00000122282 1438 ntBASIC15□□□□□ -0.01
Mmp3P28862 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms