Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gm10175-201ENSMUST00000086013 645 ntBASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1aP25118 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1aP25118 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms