Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.51□□□□□ -0.25
BdnfP21237 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.51□□□□□ -0.25
BdnfP21237 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.51□□□□□ -0.25
BdnfP21237 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.51□□□□□ -0.25
BdnfP21237 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
BdnfP21237 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
BdnfP21237 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.5□□□□□ -0.25
BdnfP21237 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Gm5479-201ENSMUST00000160578 435 ntBASIC13.5□□□□□ -0.25
BdnfP21237 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.5□□□□□ -0.25
BdnfP21237 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.5□□□□□ -0.25
BdnfP21237 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.5□□□□□ -0.25
BdnfP21237 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
BdnfP21237 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.5□□□□□ -0.25
BdnfP21237 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
BdnfP21237 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
BdnfP21237 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
BdnfP21237 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BdnfP21237 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
BdnfP21237 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
BdnfP21237 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.49□□□□□ -0.25
BdnfP21237 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
BdnfP21237 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
BdnfP21237 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms