Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx1P18111 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx1P18111 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx1P18111 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdx1P18111 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdx1P18111 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Gm18622-201ENSMUST00000219361 595 ntBASIC11.4□□□□□ -0.58
Cdx1P18111 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.4□□□□□ -0.58
Cdx1P18111 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.4□□□□□ -0.58
Cdx1P18111 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdx1P18111 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdx1P18111 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.4□□□□□ -0.59
Cdx1P18111 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdx1P18111 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdx1P18111 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Cdx1P18111 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdx1P18111 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cdx1P18111 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdx1P18111 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdx1P18111 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Mir8117-201ENSMUST00000184773 107 ntBASIC11.39□□□□□ -0.59
Cdx1P18111 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.39□□□□□ -0.59
Cdx1P18111 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdx1P18111 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cdx1P18111 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdx1P18111 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdx1P18111 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdx1P18111 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdx1P18111 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdx1P18111 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cdx1P18111 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.38□□□□□ -0.59
Cdx1P18111 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdx1P18111 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cdx1P18111 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdx1P18111 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms