Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ccl3P10855 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccl3P10855 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccl3P10855 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm38223-201ENSMUST00000194484 695 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccl3P10855 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccl3P10855 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.38□□□□□ -0.43
Ccl3P10855 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccl3P10855 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ccl3P10855 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl3P10855 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccl3P10855 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.37□□□□□ -0.43
Ccl3P10855 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.37□□□□□ -0.43
Ccl3P10855 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ccl3P10855 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.37□□□□□ -0.43
Ccl3P10855 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ccl3P10855 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.37□□□□□ -0.43
Ccl3P10855 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccl3P10855 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl3P10855 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.37□□□□□ -0.43
Ccl3P10855 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ccl3P10855 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ccl3P10855 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccl3P10855 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ccl3P10855 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl3P10855 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccl3P10855 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.36□□□□□ -0.43
Ccl3P10855 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms