Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.32□□□□□ -0.12
Rc3h2P0C090 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h2P0C090 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h2P0C090 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.3□□□□□ -0.12
Rc3h2P0C090 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.3□□□□□ -0.12
Rc3h2P0C090 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.3□□□□□ -0.12
Rc3h2P0C090 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h2P0C090 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.29□□□□□ -0.12
Rc3h2P0C090 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gm14127-201ENSMUST00000117906 678 ntBASIC14.29□□□□□ -0.12
Rc3h2P0C090 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.29□□□□□ -0.12
Rc3h2P0C090 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h2P0C090 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.29□□□□□ -0.12
Rc3h2P0C090 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.29□□□□□ -0.12
Rc3h2P0C090 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms