Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.91□□□□□ -0.02
TnfP06804 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TnfP06804 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.91□□□□□ -0.02
TnfP06804 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Gm12138-201ENSMUST00000122180 951 ntBASIC14.91□□□□□ -0.02
TnfP06804 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.91□□□□□ -0.02
TnfP06804 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TnfP06804 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TnfP06804 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TnfP06804 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TnfP06804 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.9□□□□□ -0.02
TnfP06804 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TnfP06804 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TnfP06804 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Gm12341-201ENSMUST00000119724 503 ntBASIC14.9□□□□□ -0.02
TnfP06804 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.9□□□□□ -0.02
TnfP06804 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.9□□□□□ -0.02
TnfP06804 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.9□□□□□ -0.02
TnfP06804 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TnfP06804 Mir497b-201ENSMUST00000093601 125 ntBASIC14.9□□□□□ -0.02
TnfP06804 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.9□□□□□ -0.02
TnfP06804 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TnfP06804 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.9□□□□□ -0.02
TnfP06804 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TnfP06804 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TnfP06804 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TnfP06804 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.89□□□□□ -0.03
TnfP06804 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.89□□□□□ -0.03
TnfP06804 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms