Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04940 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04940 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04940 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
P04940 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04940 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04940 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
P04940 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.41□□□□□ -0.58
P04940 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
P04940 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.41□□□□□ -0.58
P04940 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P04940 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P04940 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.41□□□□□ -0.58
P04940 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.41□□□□□ -0.58
P04940 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.41□□□□□ -0.58
P04940 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P04940 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P04940 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P04940 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.41□□□□□ -0.58
P04940 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P04940 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.41□□□□□ -0.58
P04940 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04940 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.4□□□□□ -0.58
P04940 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.4□□□□□ -0.58
P04940 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P04940 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
P04940 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
P04940 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P04940 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P04940 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04940 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04940 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Gm15460-201ENSMUST00000118147 391 ntBASIC11.4□□□□□ -0.58
P04940 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.4□□□□□ -0.58
P04940 Gm22175-201ENSMUST00000175007 78 ntBASIC11.4□□□□□ -0.58
P04940 Gm27680-201ENSMUST00000184192 160 ntBASIC11.4□□□□□ -0.58
P04940 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.4□□□□□ -0.58
P04940 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P04940 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.4□□□□□ -0.58
P04940 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.4□□□□□ -0.58
P04940 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.4□□□□□ -0.58
P04940 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04940 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.4□□□□□ -0.58
P04940 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04940 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04940 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04940 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
P04940 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
P04940 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04940 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04940 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
P04940 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.39□□□□□ -0.59
P04940 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.39□□□□□ -0.59
P04940 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.39□□□□□ -0.59
P04940 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.39□□□□□ -0.59
P04940 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms