Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P04224 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P04224 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P04224 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.37□□□□□ -0.43
P04224 Gm37153-201ENSMUST00000193637 231 ntBASIC12.37□□□□□ -0.43
P04224 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.37□□□□□ -0.43
P04224 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
P04224 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.37□□□□□ -0.43
P04224 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.37□□□□□ -0.43
P04224 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.37□□□□□ -0.43
P04224 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.37□□□□□ -0.43
P04224 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P04224 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P04224 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P04224 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P04224 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.36□□□□□ -0.43
P04224 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.36□□□□□ -0.43
P04224 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
P04224 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.36□□□□□ -0.43
P04224 Gm9682-201ENSMUST00000197505 556 ntBASIC12.36□□□□□ -0.43
P04224 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.36□□□□□ -0.43
P04224 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.36□□□□□ -0.43
P04224 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.36□□□□□ -0.43
P04224 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
P04224 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P04224 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
P04224 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.35□□□□□ -0.43
P04224 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
P04224 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.35□□□□□ -0.43
P04224 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
P04224 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.35□□□□□ -0.43
P04224 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.35□□□□□ -0.43
P04224 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
P04224 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.35□□□□□ -0.43
P04224 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.35□□□□□ -0.43
P04224 Gm7787-201ENSMUST00000216858 688 ntBASIC12.35□□□□□ -0.43
P04224 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.35□□□□□ -0.43
P04224 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
P04224 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.35□□□□□ -0.43
P04224 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms