Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.28■□□□□ 0.52
Apaf1O88879 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Apaf1O88879 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Apaf1O88879 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Apaf1O88879 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Apaf1O88879 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Apaf1O88879 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Gm4804-201ENSMUST00000182234 999 ntBASIC18.27■□□□□ 0.52
Apaf1O88879 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.27■□□□□ 0.52
Apaf1O88879 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.27■□□□□ 0.52
Apaf1O88879 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.27■□□□□ 0.52
Apaf1O88879 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.27■□□□□ 0.52
Apaf1O88879 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Apaf1O88879 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Apaf1O88879 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Apaf1O88879 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Apaf1O88879 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Apaf1O88879 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.26■□□□□ 0.51
Apaf1O88879 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.26■□□□□ 0.51
Apaf1O88879 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Apaf1O88879 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Apaf1O88879 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm15240-201ENSMUST00000118156 720 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm8927-201ENSMUST00000181978 981 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.25■□□□□ 0.51
Apaf1O88879 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm3222-201ENSMUST00000071282 990 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Apaf1O88879 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.25■□□□□ 0.51
Apaf1O88879 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apaf1O88879 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
Apaf1O88879 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms