Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pdlim1O70400 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim1O70400 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pdlim1O70400 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.92□□□□□ -0.18
Pdlim1O70400 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Auts2-212ENSMUST00000178555 309 ntBASIC13.91□□□□□ -0.18
Pdlim1O70400 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pdlim1O70400 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.91□□□□□ -0.18
Pdlim1O70400 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Pdlim1O70400 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.91□□□□□ -0.18
Pdlim1O70400 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim1O70400 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim1O70400 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Gm10766-202ENSMUST00000194123 606 ntBASIC13.9□□□□□ -0.18
Pdlim1O70400 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim1O70400 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim1O70400 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim1O70400 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pdlim1O70400 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim1O70400 Gm4875-201ENSMUST00000118257 786 ntBASIC13.89□□□□□ -0.19
Pdlim1O70400 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.89□□□□□ -0.19
Pdlim1O70400 Gm27838-201ENSMUST00000184829 128 ntBASIC13.89□□□□□ -0.19
Pdlim1O70400 Gm20949-201ENSMUST00000206478 952 ntBASIC13.89□□□□□ -0.19
Pdlim1O70400 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms