Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Rprl2-201ENSMUST00000157150 290 ntBASIC14.23□□□□□ -0.13
ChkaO54804 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.23□□□□□ -0.13
ChkaO54804 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.23□□□□□ -0.13
ChkaO54804 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ChkaO54804 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ChkaO54804 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.22□□□□□ -0.13
ChkaO54804 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Gm13015-201ENSMUST00000118674 204 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.22□□□□□ -0.13
ChkaO54804 Gm15957-201ENSMUST00000118893 974 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ChkaO54804 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ChkaO54804 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.22□□□□□ -0.13
ChkaO54804 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ChkaO54804 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ChkaO54804 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.21□□□□□ -0.13
ChkaO54804 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.21□□□□□ -0.13
ChkaO54804 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.21□□□□□ -0.13
ChkaO54804 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ChkaO54804 Gm13365-201ENSMUST00000121188 973 ntBASIC14.21□□□□□ -0.13
ChkaO54804 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.21□□□□□ -0.13
ChkaO54804 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ChkaO54804 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ChkaO54804 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.21□□□□□ -0.13
ChkaO54804 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ChkaO54804 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChkaO54804 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ChkaO54804 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.21□□□□□ -0.13
ChkaO54804 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChkaO54804 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ChkaO54804 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
ChkaO54804 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
ChkaO54804 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChkaO54804 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
ChkaO54804 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ChkaO54804 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ChkaO54804 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.2□□□□□ -0.14
ChkaO54804 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ChkaO54804 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ChkaO54804 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChkaO54804 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.2□□□□□ -0.14
ChkaO54804 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChkaO54804 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.2□□□□□ -0.14
ChkaO54804 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms