Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Lsm2O35900 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm2O35900 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm2O35900 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.54□□□□□ -0.4
Lsm2O35900 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm2O35900 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm2O35900 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm2O35900 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Lsm2O35900 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Gm12882-201ENSMUST00000121696 517 ntBASIC12.53□□□□□ -0.4
Lsm2O35900 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.53□□□□□ -0.4
Lsm2O35900 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Gm27300-201ENSMUST00000184085 97 ntBASIC12.53□□□□□ -0.4
Lsm2O35900 Gm27335-201ENSMUST00000184758 97 ntBASIC12.53□□□□□ -0.4
Lsm2O35900 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.53□□□□□ -0.4
Lsm2O35900 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Lsm2O35900 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.53□□□□□ -0.4
Lsm2O35900 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Lsm2O35900 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm2O35900 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm2O35900 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.52□□□□□ -0.4
Lsm2O35900 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm2O35900 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Lsm2O35900 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Lsm2O35900 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.52□□□□□ -0.4
Lsm2O35900 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm2O35900 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.52□□□□□ -0.4
Lsm2O35900 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm2O35900 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Lsm2O35900 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lsm2O35900 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Lsm2O35900 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.52□□□□□ -0.41
Lsm2O35900 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm2O35900 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm2O35900 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm2O35900 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm2O35900 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm2O35900 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm2O35900 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm2O35900 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.52□□□□□ -0.41
Lsm2O35900 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm2O35900 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm2O35900 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms