Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.81□□□□□ -0.36
Matn3O35701 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Matn3O35701 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Matn3O35701 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.8□□□□□ -0.36
Matn3O35701 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.8□□□□□ -0.36
Matn3O35701 Gm18489-201ENSMUST00000172565 551 ntBASIC12.8□□□□□ -0.36
Matn3O35701 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.8□□□□□ -0.36
Matn3O35701 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Matn3O35701 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Matn3O35701 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Matn3O35701 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.79□□□□□ -0.36
Matn3O35701 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.79□□□□□ -0.36
Matn3O35701 AW822252-206ENSMUST00000208904 237 ntBASIC12.79□□□□□ -0.36
Matn3O35701 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.79□□□□□ -0.36
Matn3O35701 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Matn3O35701 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.79□□□□□ -0.36
Matn3O35701 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.79□□□□□ -0.36
Matn3O35701 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Matn3O35701 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Matn3O35701 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Matn3O35701 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Matn3O35701 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.78□□□□□ -0.36
Matn3O35701 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Matn3O35701 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.78□□□□□ -0.36
Matn3O35701 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.78□□□□□ -0.36
Matn3O35701 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Matn3O35701 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Matn3O35701 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Matn3O35701 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms