Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6bO35451 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6bO35451 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6bO35451 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Gm15693-201ENSMUST00000120470 637 ntBASIC12.26□□□□□ -0.45
Atf6bO35451 Gm27430-201ENSMUST00000184585 107 ntBASIC12.26□□□□□ -0.45
Atf6bO35451 Gm44333-201ENSMUST00000197168 107 ntBASIC12.26□□□□□ -0.45
Atf6bO35451 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.26□□□□□ -0.45
Atf6bO35451 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf6bO35451 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6bO35451 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf6bO35451 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6bO35451 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Atf6bO35451 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.25□□□□□ -0.45
Atf6bO35451 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.25□□□□□ -0.45
Atf6bO35451 Gm6415-201ENSMUST00000118488 348 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Gm15920-201ENSMUST00000118998 402 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Gm13823-201ENSMUST00000119930 345 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Mir6956-201ENSMUST00000183598 62 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Gm18766-201ENSMUST00000189811 808 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf6bO35451 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf6bO35451 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf6bO35451 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atf6bO35451 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf6bO35451 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.25□□□□□ -0.45
Atf6bO35451 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6bO35451 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.24□□□□□ -0.45
Atf6bO35451 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.24□□□□□ -0.45
Atf6bO35451 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf6bO35451 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Atf6bO35451 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf6bO35451 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms