Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.56□□□□□ -0.4
Alx4O35137 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Alx4O35137 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.56□□□□□ -0.4
Alx4O35137 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.56□□□□□ -0.4
Alx4O35137 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Alx4O35137 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.56□□□□□ -0.4
Alx4O35137 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Alx4O35137 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Alx4O35137 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Alx4O35137 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Alx4O35137 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Gm5864-201ENSMUST00000202263 970 ntBASIC12.55□□□□□ -0.4
Alx4O35137 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx4O35137 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx4O35137 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.54□□□□□ -0.4
Alx4O35137 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Gm12350-201ENSMUST00000121208 462 ntBASIC12.54□□□□□ -0.4
Alx4O35137 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Gm2445-201ENSMUST00000182798 989 ntBASIC12.54□□□□□ -0.4
Alx4O35137 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Gm18195-201ENSMUST00000207604 706 ntBASIC12.54□□□□□ -0.4
Alx4O35137 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.54□□□□□ -0.4
Alx4O35137 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.54□□□□□ -0.4
Alx4O35137 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Alx4O35137 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms