Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
Ebf3O08791 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ebf3O08791 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.64□□□□□ -0.07
Ebf3O08791 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
Ebf3O08791 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ebf3O08791 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ebf3O08791 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ebf3O08791 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.64□□□□□ -0.07
Ebf3O08791 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.64□□□□□ -0.07
Ebf3O08791 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.64□□□□□ -0.07
Ebf3O08791 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.64□□□□□ -0.07
Ebf3O08791 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf3O08791 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Ebf3O08791 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Ebf3O08791 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ebf3O08791 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.63□□□□□ -0.07
Ebf3O08791 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.63□□□□□ -0.07
Ebf3O08791 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.63□□□□□ -0.07
Ebf3O08791 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.63□□□□□ -0.07
Ebf3O08791 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.63□□□□□ -0.07
Ebf3O08791 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.63□□□□□ -0.07
Ebf3O08791 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.63□□□□□ -0.07
Ebf3O08791 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf3O08791 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ebf3O08791 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.62□□□□□ -0.07
Ebf3O08791 BC001981-202ENSMUST00000191393 1545 ntBASIC14.62□□□□□ -0.07
Ebf3O08791 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ebf3O08791 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.62□□□□□ -0.07
Ebf3O08791 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.62□□□□□ -0.07
Ebf3O08791 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.62□□□□□ -0.07
Ebf3O08791 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.62□□□□□ -0.07
Ebf3O08791 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms