Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm43867-201ENSMUST00000203860 525 ntBASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 CT009728.1-201ENSMUST00000225228 1050 ntBASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 AC115357.1-201ENSMUST00000227575 466 ntBASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx1-1G3UXB3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Nkx1-1G3UXB3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Nkx1-1G3UXB3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm15741-201ENSMUST00000119401 754 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm25668-201ENSMUST00000157700 129 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm24196-201ENSMUST00000179161 110 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm4804-201ENSMUST00000182234 999 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm45240-201ENSMUST00000211437 674 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx1-1G3UXB3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm17376-201ENSMUST00000166016 84 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm28437-201ENSMUST00000190277 783 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm45098-201ENSMUST00000207179 657 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gm38055-201ENSMUST00000195353 2217 ntBASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx1-1G3UXB3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx1-1G3UXB3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx1-1G3UXB3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms