Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Gm18307-201ENSMUST00000206864 949 ntBASIC14.27□□□□□ -0.13
Ccdc149F6V035 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Gm15240-201ENSMUST00000118156 720 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Gm9002-201ENSMUST00000178437 499 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.26□□□□□ -0.13
Ccdc149F6V035 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc149F6V035 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Mir7654-201ENSMUST00000185082 70 ntBASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc149F6V035 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.24□□□□□ -0.13
Ccdc149F6V035 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.24□□□□□ -0.13
Ccdc149F6V035 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Gm13385-201ENSMUST00000121089 220 ntBASIC14.24□□□□□ -0.13
Ccdc149F6V035 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc149F6V035 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms