Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm45224-201ENSMUST00000208203 414 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm7003-201ENSMUST00000195089 312 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a3E9PWQ3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm4862-201ENSMUST00000170405 438 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm29608-201ENSMUST00000190444 463 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm45527-201ENSMUST00000211052 774 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Mir181d-201ENSMUST00000102383 72 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms