Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Gm15370-201ENSMUST00000117158 253 ntBASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Gm12997-201ENSMUST00000120207 640 ntBASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Hfm1D3Z4R1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm10608-202ENSMUST00000213924 676 ntBASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm4986-201ENSMUST00000119731 549 ntBASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm20482-202ENSMUST00000174729 825 ntBASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm6082-201ENSMUST00000215204 454 ntBASIC19.42■□□□□ 0.7
Hfm1D3Z4R1 Gm43579-201ENSMUST00000202387 1307 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm20632-201ENSMUST00000176760 2427 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Abhd6-203ENSMUST00000225234 1958 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm7809-201ENSMUST00000153199 742 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 AC155637.1-201ENSMUST00000218560 636 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Gm16372-201ENSMUST00000073088 450 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.41■□□□□ 0.7
Hfm1D3Z4R1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Gm3890-201ENSMUST00000182416 207 ntBASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms