Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gm12151-201ENSMUST00000121374 290 ntBASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.69□□□□□ -0.22
Clip3B9EHT4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.69□□□□□ -0.22
Clip3B9EHT4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip3B9EHT4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Carlr-201ENSMUST00000181515 2574 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm27989-201ENSMUST00000184721 107 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm27321-201ENSMUST00000185021 205 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm28630-201ENSMUST00000187806 498 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.68□□□□□ -0.22
Clip3B9EHT4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clip3B9EHT4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Gm9719-201ENSMUST00000162765 543 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Gm37230-201ENSMUST00000194491 818 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Clip3B9EHT4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clip3B9EHT4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip3B9EHT4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms