Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.28□□□□□ -0.6
Chd6A3KFM7 Gm43610-201ENSMUST00000199117 365 ntBASIC11.28□□□□□ -0.6
Chd6A3KFM7 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.28□□□□□ -0.6
Chd6A3KFM7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.28□□□□□ -0.6
Chd6A3KFM7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd6A3KFM7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd6A3KFM7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd6A3KFM7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd6A3KFM7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd6A3KFM7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd6A3KFM7 Gm7541-201ENSMUST00000118361 535 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gm37922-201ENSMUST00000195596 455 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gm13464-201ENSMUST00000119418 935 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.27□□□□□ -0.61
Chd6A3KFM7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd6A3KFM7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.26□□□□□ -0.61
Chd6A3KFM7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.26□□□□□ -0.61
Chd6A3KFM7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.26□□□□□ -0.61
Chd6A3KFM7 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.26□□□□□ -0.61
Chd6A3KFM7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.26□□□□□ -0.61
Chd6A3KFM7 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd6A3KFM7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.25□□□□□ -0.61
Chd6A3KFM7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.25□□□□□ -0.61
Chd6A3KFM7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.25□□□□□ -0.61
Chd6A3KFM7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd6A3KFM7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms