Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Trav7n-4A0A075B620 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm29518-201ENSMUST00000190858 372 ntBASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm9182-201ENSMUST00000217829 639 ntBASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav7n-4A0A075B620 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm15565-201ENSMUST00000118890 427 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Olfr129-201ENSMUST00000122318 993 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm9682-201ENSMUST00000197505 556 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav7n-4A0A075B620 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav7n-4A0A075B620 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms