Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm25144-201ENSMUST00000179561 110 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm25352-201ENSMUST00000179815 110 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn3Q9Z0G9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn3Q9Z0G9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn3Q9Z0G9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn3Q9Z0G9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms