Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClcnkaQ9WUB7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClcnkaQ9WUB7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm6539-201ENSMUST00000119157 1064 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm29310-201ENSMUST00000185468 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21825-201ENSMUST00000185728 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm29109-201ENSMUST00000185895 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21896-201ENSMUST00000186520 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21873-201ENSMUST00000186728 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21794-201ENSMUST00000187056 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21880-201ENSMUST00000187275 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21826-201ENSMUST00000187451 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21198-201ENSMUST00000188393 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21749-201ENSMUST00000189343 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21901-201ENSMUST00000189568 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm29424-201ENSMUST00000189716 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm28599-201ENSMUST00000189838 694 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21867-201ENSMUST00000189917 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm29269-201ENSMUST00000190087 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21722-201ENSMUST00000190153 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm28423-201ENSMUST00000190701 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21899-201ENSMUST00000190745 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21910-201ENSMUST00000191163 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21849-201ENSMUST00000191571 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm28678-201ENSMUST00000191593 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm20910-201ENSMUST00000193268 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm21871-201ENSMUST00000194621 696 ntBASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ClcnkaQ9WUB7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms