Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf4Q9QZS2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf4Q9QZS2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm5867-201ENSMUST00000063197 592 ntBASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf4Q9QZS2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf4Q9QZS2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms