Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.28□□□□□ -0.6
Smco4Q9JIS3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco4Q9JIS3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smco4Q9JIS3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Gm37179-201ENSMUST00000194862 823 ntBASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Gm10566-201ENSMUST00000086739 996 ntBASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smco4Q9JIS3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm26039-201ENSMUST00000158152 144 ntBASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm2274-201ENSMUST00000184539 609 ntBASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.26□□□□□ -0.61
Smco4Q9JIS3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco4Q9JIS3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms