Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.21□□□□□ -0.13
Ccdc130Q9D516 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.21□□□□□ -0.13
Ccdc130Q9D516 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc130Q9D516 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc130Q9D516 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.21□□□□□ -0.13
Ccdc130Q9D516 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc130Q9D516 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc130Q9D516 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc130Q9D516 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc130Q9D516 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc130Q9D516 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Gm17271-201ENSMUST00000165535 355 ntBASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc130Q9D516 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Gm15483-201ENSMUST00000120338 456 ntBASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Gm20553-201ENSMUST00000204205 844 ntBASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc130Q9D516 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Gm4995-201ENSMUST00000117247 432 ntBASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc130Q9D516 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms