Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Raet1eQ9CZQ6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Gm27704-201ENSMUST00000185094 107 ntBASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Gm7977-201ENSMUST00000193787 748 ntBASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1eQ9CZQ6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1eQ9CZQ6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1eQ9CZQ6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1eQ9CZQ6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Raet1eQ9CZQ6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1eQ9CZQ6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms