Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm27618-201ENSMUST00000183671 60 ntBASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gm29288-201ENSMUST00000191582 901 ntBASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg3Q9CQV4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 AC154252.1-201ENSMUST00000226041 473 ntBASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retreg3Q9CQV4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm5866-201ENSMUST00000177881 973 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm43222-201ENSMUST00000199013 603 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm16476-201ENSMUST00000221544 139 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Dupd1-202ENSMUST00000224735 548 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg3Q9CQV4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.28□□□□□ -0.12
Retreg3Q9CQV4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms