Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd2Q9CQ48 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Birc2-201ENSMUST00000054878 378 ntBASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd2Q9CQ48 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gm16026-204ENSMUST00000162652 683 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gm45098-201ENSMUST00000207179 657 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 AV026068-213ENSMUST00000223675 1171 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gm10154-201ENSMUST00000084445 354 ntBASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd2Q9CQ48 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms