Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim16Q99PP9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.82□□□□□ -0.2
Trim16Q99PP9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim16Q99PP9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm5479-201ENSMUST00000160578 435 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Mir6990-201ENSMUST00000183724 91 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trim16Q99PP9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.8□□□□□ -0.2
Trim16Q99PP9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.8□□□□□ -0.2
Trim16Q99PP9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim16Q99PP9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms