Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm21910-201ENSMUST00000191163 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm29541-201ENSMUST00000191351 678 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21849-201ENSMUST00000191571 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm28678-201ENSMUST00000191593 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm20910-201ENSMUST00000193268 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21871-201ENSMUST00000194621 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm5779-201ENSMUST00000218467 910 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm10275-202ENSMUST00000168697 495 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm42790-201ENSMUST00000201268 969 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm10275-201ENSMUST00000092620 635 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim33Q99PP7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.03□□□□□ -0.16
Trim33Q99PP7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim33Q99PP7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim33Q99PP7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.02□□□□□ -0.17
Trim33Q99PP7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim33Q99PP7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms