Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trem2Q99NH8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trem2Q99NH8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trem2Q99NH8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trem2Q99NH8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.35□□□□□ -0.11
Trem2Q99NH8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Gm24543-201ENSMUST00000103867 82 ntBASIC14.35□□□□□ -0.11
Trem2Q99NH8 Mir449b-201ENSMUST00000104833 80 ntBASIC14.35□□□□□ -0.11
Trem2Q99NH8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.35□□□□□ -0.11
Trem2Q99NH8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trem2Q99NH8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm15653-201ENSMUST00000119247 907 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm29741-201ENSMUST00000192667 421 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm44719-201ENSMUST00000206404 149 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.34□□□□□ -0.11
Trem2Q99NH8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trem2Q99NH8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trem2Q99NH8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trem2Q99NH8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trem2Q99NH8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trem2Q99NH8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Trem2Q99NH8 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.33□□□□□ -0.11
Trem2Q99NH8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.33□□□□□ -0.12
Trem2Q99NH8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.33□□□□□ -0.12
Trem2Q99NH8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.33□□□□□ -0.12
Trem2Q99NH8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms