Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm2213-201ENSMUST00000197485 688 ntBASIC13.69□□□□□ -0.22
Rnf111Q99ML9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm45612-201ENSMUST00000211320 160 ntBASIC13.69□□□□□ -0.22
Rnf111Q99ML9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.69□□□□□ -0.22
Rnf111Q99ML9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf111Q99ML9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm11745-201ENSMUST00000121669 448 ntBASIC13.68□□□□□ -0.22
Rnf111Q99ML9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm27920-201ENSMUST00000183953 96 ntBASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf111Q99ML9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf111Q99ML9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms