Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tlr3Q99MB1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Gm24543-201ENSMUST00000103867 82 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Gm8410-201ENSMUST00000117225 605 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Gm17837-201ENSMUST00000186435 985 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Gm28630-201ENSMUST00000187806 498 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Dupd1-202ENSMUST00000224735 548 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tlr3Q99MB1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.15■□□□□ 0.02
Tlr3Q99MB1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm16476-201ENSMUST00000221544 139 ntBASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlr3Q99MB1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Gm12151-201ENSMUST00000121374 290 ntBASIC15.13■□□□□ 0.01
Tlr3Q99MB1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Mir8102-201ENSMUST00000184148 139 ntBASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlr3Q99MB1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms