Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gm11745-201ENSMUST00000121669 448 ntBASIC13.65□□□□□ -0.22
Cstf3Q99LI7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gm27525-201ENSMUST00000184465 107 ntBASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cstf3Q99LI7 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm27494-201ENSMUST00000184735 189 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf3Q99LI7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf3Q99LI7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms