Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Mir497b-201ENSMUST00000093601 125 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Snora78-201ENSMUST00000158630 128 ntBASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Gm6091-201ENSMUST00000098307 165 ntBASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd2Q99JR8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd2Q99JR8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd2Q99JR8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms