Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Gm27701-201ENSMUST00000184498 110 ntBASIC14.05□□□□□ -0.16
Cacna1dQ99246 Gm37917-201ENSMUST00000194711 392 ntBASIC14.05□□□□□ -0.16
Cacna1dQ99246 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.05□□□□□ -0.16
Cacna1dQ99246 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.04□□□□□ -0.16
Cacna1dQ99246 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.04□□□□□ -0.16
Cacna1dQ99246 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1dQ99246 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm15957-201ENSMUST00000118893 974 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm8602-201ENSMUST00000184045 607 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm17795-201ENSMUST00000214505 757 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm27892-201ENSMUST00000185017 106 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm18062-201ENSMUST00000208020 547 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Gm18055-201ENSMUST00000208254 547 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.03□□□□□ -0.16
Cacna1dQ99246 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1dQ99246 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms