Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm4804-201ENSMUST00000182234 999 ntBASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.46■□□□□ 0.23
Pcdhb22Q91XZ8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb22Q91XZ8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb22Q91XZ8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Mir7684-201ENSMUST00000183858 60 ntBASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Gm10766-202ENSMUST00000194123 606 ntBASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb22Q91XZ8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Gm12151-201ENSMUST00000121374 290 ntBASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Mir8102-201ENSMUST00000184148 139 ntBASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb22Q91XZ8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Gm29741-201ENSMUST00000192667 421 ntBASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.43■□□□□ 0.22
Pcdhb22Q91XZ8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms