Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Gm8410-201ENSMUST00000117225 605 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Mir1897-201ENSMUST00000122581 272 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Gm18027-201ENSMUST00000218947 619 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb6Q91XZ4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Gm27618-201ENSMUST00000183671 60 ntBASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Gm37714-201ENSMUST00000194742 342 ntBASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb6Q91XZ4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms