Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc5Q91XW9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Mir6420-201ENSMUST00000185032 102 ntBASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Gm45453-201ENSMUST00000211758 853 ntBASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc5Q91XW9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Gm6007-201ENSMUST00000208170 823 ntBASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc5Q91XW9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Gm9229-201ENSMUST00000222777 126 ntBASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Gm9899-201ENSMUST00000065519 555 ntBASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc5Q91XW9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc5Q91XW9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms