Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf8Q8VC56 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gm4995-201ENSMUST00000117247 432 ntBASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf8Q8VC56 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.61□□□□□ -0.23
Rnf8Q8VC56 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gm11543-201ENSMUST00000120758 370 ntBASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gm26308-201ENSMUST00000157768 69 ntBASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gm43575-201ENSMUST00000196420 516 ntBASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf8Q8VC56 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.6□□□□□ -0.23
Rnf8Q8VC56 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf8Q8VC56 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms