Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpp40Q8R1F9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rpp40Q8R1F9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpp40Q8R1F9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rpp40Q8R1F9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpp40Q8R1F9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rpp40Q8R1F9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.08■□□□□ 0
Rpp40Q8R1F9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm4804-201ENSMUST00000182234 999 ntBASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm42612-201ENSMUST00000197986 623 ntBASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm43170-201ENSMUST00000199827 612 ntBASIC15.08■□□□□ 0
Rpp40Q8R1F9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm9797-201ENSMUST00000052902 613 ntBASIC15.08■□□□□ 0
Rpp40Q8R1F9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp40Q8R1F9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm7488-201ENSMUST00000117148 684 ntBASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.07■□□□□ 0
Rpp40Q8R1F9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.07■□□□□ 0
Rpp40Q8R1F9 Mir497b-201ENSMUST00000093601 125 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms