Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm8344-201ENSMUST00000119813 856 ntBASIC8.87□□□□□ -0.99
Cystm1Q8K353 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm8000-201ENSMUST00000188378 592 ntBASIC8.87□□□□□ -0.99
Cystm1Q8K353 AC084391.1-201ENSMUST00000200651 141 ntBASIC8.87□□□□□ -0.99
Cystm1Q8K353 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cystm1Q8K353 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC8.86□□□□□ -0.99
Cystm1Q8K353 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms