Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim68Q8K243 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim68Q8K243 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim68Q8K243 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.32■□□□□ 0.04
Trim68Q8K243 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Gm17150-201ENSMUST00000165577 381 ntBASIC15.32■□□□□ 0.04
Trim68Q8K243 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.32■□□□□ 0.04
Trim68Q8K243 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim68Q8K243 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim68Q8K243 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.31■□□□□ 0.04
Trim68Q8K243 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.31■□□□□ 0.04
Trim68Q8K243 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.31■□□□□ 0.04
Trim68Q8K243 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim68Q8K243 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim68Q8K243 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Trim68Q8K243 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Gm11425-201ENSMUST00000119608 498 ntBASIC15.3■□□□□ 0.04
Trim68Q8K243 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim68Q8K243 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim68Q8K243 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim68Q8K243 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Gm9396-201ENSMUST00000076703 567 ntBASIC15.3■□□□□ 0.04
Trim68Q8K243 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim68Q8K243 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim68Q8K243 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim68Q8K243 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim68Q8K243 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trim68Q8K243 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim68Q8K243 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim68Q8K243 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms