Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Matn2-206ENSMUST00000228570 2798 ntBASIC13.5□□□□□ -0.25
CroccQ8CJ40 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.5□□□□□ -0.25
CroccQ8CJ40 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.5□□□□□ -0.25
CroccQ8CJ40 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.5□□□□□ -0.25
CroccQ8CJ40 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.5□□□□□ -0.25
CroccQ8CJ40 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CroccQ8CJ40 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Gm5867-201ENSMUST00000063197 592 ntBASIC13.49□□□□□ -0.25
CroccQ8CJ40 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Gm26308-201ENSMUST00000157768 69 ntBASIC13.49□□□□□ -0.25
CroccQ8CJ40 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CroccQ8CJ40 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.49□□□□□ -0.25
CroccQ8CJ40 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CroccQ8CJ40 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.48□□□□□ -0.25
CroccQ8CJ40 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.48□□□□□ -0.25
CroccQ8CJ40 Gm9229-201ENSMUST00000222777 126 ntBASIC13.48□□□□□ -0.25
CroccQ8CJ40 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.48□□□□□ -0.25
CroccQ8CJ40 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms