Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.87■□□□□ 0.13
Syne4Q8CII8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syne4Q8CII8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.86■□□□□ 0.13
Syne4Q8CII8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.86■□□□□ 0.13
Syne4Q8CII8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.86■□□□□ 0.13
Syne4Q8CII8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.86■□□□□ 0.13
Syne4Q8CII8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.86■□□□□ 0.13
Syne4Q8CII8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syne4Q8CII8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Carlr-201ENSMUST00000181515 2574 ntBASIC15.85■□□□□ 0.13
Syne4Q8CII8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Gm14723-201ENSMUST00000118686 215 ntBASIC15.85■□□□□ 0.13
Syne4Q8CII8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.85■□□□□ 0.13
Syne4Q8CII8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.85■□□□□ 0.13
Syne4Q8CII8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm27331-201ENSMUST00000183705 60 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm19184-201ENSMUST00000196798 928 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm8598-201ENSMUST00000221184 836 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm9823-201ENSMUST00000051212 327 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.84■□□□□ 0.13
Syne4Q8CII8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Syne4Q8CII8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms